jis
Permanent Way Inspector
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The Brits and the Japanese seem to handle this well by doing seat reservations only in a subset of the cars in a train, leaving the other cars open. They even allow standees in the non-reserved cars in Japan, and any car of the class shown on the ticket in the UK. Seems to work out just fine.One possible answer to this would be (okay, I'll put on my flame-retardant suit on now) taking a page out of the airline book, and charging those who want a specific seat or room assignment in advance. Otherwise, you get it upon check-in (or an auto-assignment a few hours before departure).
I have done a standee trip standing in a toilet on an Shinkansen between Osaka and Yokohama, and standing in the aisle of more than one British train. My last trip to UK for a week, I had no reservations on any trains in the UK, which was very convenient since my train choices changed at the last minute several times. The only reservation with assigned seats that I had were on Eurostars and Thalys, and in that case I got on the website and moved myself to better seats after the system assigned me some random seat when I made the reservation. Since I got my ticket two days before departure most seats on the train were already spoken for. I had to hunt through several cars to find my preferred seat.